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to manage all your NGS workflows and data

The LIMS + ELN features make SLIMS the perfect solution

Smooth and flawless management of NGS workflows

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NGS 2018-01-29T16:44:00+00:00
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SLIMS for NGS

The LIMS + ELN features make SLIMS the perfect solution
to manage your NGS workflows and data

Do you want to make your NGS management simple, smooth and automated?

Workflows Management

The SLIMS platform offers a complete workflow solution easily integrating with protocols and external analysis solutions.

SLIMS provides you with the complete workflow support with a simple graphical representation. The platform easily integrates with protocols and external analysis platforms.

Please see our Partnerships page for more info on these integrations.

Workflow
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Sequencers Integration

SLIMS supports easy sample sheet creation and export, plate design and management of sequencing files from a panel of different sequencers.

Galaxy Integration

Use your Galaxy Workflows directly in SLIMS !

The Galaxy platform is fully integrated with SLIMS allowing you to design your workflows and use them directly within the SLIMS workflow module.

SLIMS fully supports the generation of analysis with the files created during your experiment on the sequencers. There is no need to manually download your files between platforms as everything is fully accessible in SLIMS.

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GenePattern Integration

SLIMS is fully integrated with GenePattern analysis pipelines 

You can use GenePattern to run complex data analysis directly within SLIMS. Manage your data analysis pipelines from GenePattern directly within your SLIMS workflow.

Import and export data and files with the GenePattern platform to get your analysis results and keep everything in one single place !

Analysis Tools

SLIMS supports different analysis tools, such as Python, R, Alamut and Saphetor. Furthermore a special tool will help you register your variants.

Write your own custom scripts with Python or R to get personalized results from your SLIMS data.

SLIMS allows a full sample-to-insight workflow thanks to the external analysis platforms integration.

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Downloads

Technical Note

Here is information on SLIMS for NGS

Please check out the NGS Technical Note

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Case Study

Here is how our Aalborg NGS customers profit from SLIMS

Please check out the case study describing the NGS settings at the Department of Molecular Diagnostic of the University Hospital of Aalborg, Denmark

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Case Study

Here is how our Multiplicom NGS customers profit from SLIMS  

Please check out the case study describing the NGS settings at Multiplicom in Belgium

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Biobanks

An out-of-the-box
management solution
for your Biobank

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Research

A customizable LIMS + ELN
and order management
solution

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NGS

Smooth and flawless
management of your NGS
workflows and data

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Diagnostics

Fully control your workflows
and routines and track
your samples

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